Dadaist2 - Metabarcoding analysis from reads to R

1. Installation
2. Dadaist2 features
3. Dadaist2: a first tutorial
4. Other tutorials
5. Advanced usage

Development notes

1. General information
2. ITS analysis
3. Numerical ecology
4. MultiQC report
5. Continuous integration
6. Integration with R

1. dadaist2
2. dadaist2-addTaxToFasta
3. dadaist2-alpha
4. dadaist2-assigntax
5. dadaist2-dada2fasta
6. dadaist2-exporter
7. dadaist2-getdb
8. dadaist2-getdb-legacy
9. dadaist2-importq2
10. dadaist2-metadata
11. dadaist2-normalize
12. dadaist2-phyloseqCheck
13. dadaist2-mqc-report
13. dadaist2-phyloseqMake
14. dadaist2-phyloseqMake-legacy
15. dadaist2-taxonomy-binning
16. dadaist2-taxplot
17. dadaist2-crosstalk
18. dadaist2-mergeseqs
19. dadaist2-checkstats
20. dadaist2-rundada

Dadaist2 - Metabarcoding analysis from reads to R

notes
README.md

Development notes

General information
ITS analysis
Numerical ecology
MultiQC report
Continuous integration
Integration with R

2025, Quadram Institute Bioscience Revision 64203c4

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Dadaist2 - Metabarcoding analysis from reads to R

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This Software is under the terms of The Unlicense.