Dadaist2 - Metabarcoding analysis from reads to R
  • 1. Installation
  • 2. Dadaist2 features
  • 3. Dadaist2: a first tutorial
  • 4. Other tutorials
  • 5. Advanced usage
Development notes
  • 1. General information
  • 2. ITS analysis
  • 3. Numerical ecology
  • 4. MultiQC report
  • 5. Continuous integration
  • 6. Integration with R
Help pages
  • 1. dadaist2
  • 2. dadaist2-addTaxToFasta
  • 3. dadaist2-alpha
  • 4. dadaist2-assigntax
  • 5. dadaist2-dada2fasta
  • 6. dadaist2-exporter
  • 7. dadaist2-getdb
  • 8. dadaist2-getdb-legacy
  • 9. dadaist2-importq2
  • 10. dadaist2-metadata
  • 11. dadaist2-normalize
  • 12. dadaist2-phyloseqCheck
  • 13. dadaist2-mqc-report
  • 13. dadaist2-phyloseqMake
  • 14. dadaist2-phyloseqMake-legacy
  • 15. dadaist2-taxonomy-binning
  • 16. dadaist2-taxplot
  • 17. dadaist2-crosstalk
  • 18. dadaist2-mergeseqs
  • 19. dadaist2-checkstats
  • 20. dadaist2-rundada
Dadaist2 - Metabarcoding analysis from reads to R
  • pages
  • README.md

Help pages

This section contains the help pages of the tools provided by dadaist2 in alphabetical order. All the wrappers documentation is updated at each commit, while other tools are update at each release.

  • dadaist2
  • dadaist2-addTaxToFasta
  • dadaist2-alpha
  • dadaist2-assigntax
  • dadaist2-dada2fasta
  • dadaist2-exporter
  • dadaist2-getdb
  • dadaist2-getdb-legacy
  • dadaist2-importq2
  • dadaist2-metadata
  • dadaist2-normalize
  • dadaist2-phyloseqCheck
  • dadaist2-mqc-report
  • dadaist2-phyloseqMake
  • dadaist2-phyloseqMake-legacy
  • dadaist2-taxonomy-binning
  • dadaist2-taxplot
  • dadaist2-crosstalk
  • dadaist2-mergeseqs
  • dadaist2-checkstats
  • dadaist2-rundada
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2025, Quadram Institute Bioscience Revision 64203c4
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This Software is under the terms of The Unlicense.